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  5. LOC_Os04g51110.1

LOC_Os04g51110.1 (CDC20.1, LOC_Os04g51110)


Aliases : CDC20.1, LOC_Os04g51110

Description : CDC20-type (APC/C)-dependent ubiquitination activator protein


Gene families : OG0001302 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001302_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51110.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00091330 CDC20.1,... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
AT4G33260 CDC20.2 Transducin family protein / WD-40 repeat family protein 0.11 OrthoFinder output from all 47 species
AT4G33270 CDC20.1 Transducin family protein / WD-40 repeat family protein 0.06 OrthoFinder output from all 47 species
AT5G27945 No alias Transducin/WD40 repeat-like superfamily protein 0.01 OrthoFinder output from all 47 species
Aop_g02229 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35395.t1 CDC20.2, Aspi01Gene35395 substrate specificity component *(CDC20) of APC/C E3... 0.06 OrthoFinder output from all 47 species
Azfi_s0021.g015621 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015644 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Azfi_s0021.g015647 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Cba_g05252 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Cre09.g399911 CDC20.2 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
Gb_04004 CDC20.2 Cell division cycle 20.2, cofactor of APC complex... 0.04 OrthoFinder output from all 47 species
Gb_04843 CDC20.2 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.02 OrthoFinder output from all 47 species
Lfl_g06679 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Mp3g00030.1 CDC20.2 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.08 OrthoFinder output from all 47 species
Ore_g32238 CDC20.2 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004643 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.02 OrthoFinder output from all 47 species
Smo139237 CDC20.1 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.03 OrthoFinder output from all 47 species
Smo229944 CDC20.2 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.02 OrthoFinder output from all 47 species
Smo92939 CDC20.2 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.05 OrthoFinder output from all 47 species
Solyc03g096870.3.1 CDC20.1, Solyc03g096870 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.09 OrthoFinder output from all 47 species
Solyc06g072830.4.1 CDC20.1, Solyc06g072830 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.09 OrthoFinder output from all 47 species
Tin_g29028 CDC20.1 substrate specificity component *(CDC20) of APC/C E3... 0.03 OrthoFinder output from all 47 species
Zm00001e014230_P001 CDC20.1, Zm00001e014230 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.04 OrthoFinder output from all 47 species
Zm00001e023310_P002 CDC20.2, Zm00001e023310 CDC20-type (APC/C)-dependent ubiquitination activator protein 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 188 248
IPR001680 WD40_repeat 447 475
IPR001680 WD40_repeat 271 306
IPR001680 WD40_repeat 322 360
No external refs found!