1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g51070.1

LOC_Os04g51070.1 (LOC_Os04g51070)


Aliases : LOC_Os04g51070

Description : transcription factor (bHLH)


Gene families : OG0005877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005877_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g51070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00183690 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Ceric.14G094900.1 Ceric.14G094900 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.21G089700.1 Ceric.21G089700 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Msp_g41404 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g16733 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Smo81013 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 OrthoFinder output from all 47 species
Solyc01g081090.2.1 Solyc01g081090 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc01g081100.3.1 Solyc01g081100 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g43678 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 265 310
No external refs found!