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  5. LOC_Os04g50860.1

LOC_Os04g50860.1 (LOC_Os04g50860)


Aliases : LOC_Os04g50860

Description : UV-B-induced protein At3g17800, chloroplastic OS=Arabidopsis thaliana (sp|q9lvj0|uvb31_arath : 285.0)


Gene families : OG0000927 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000927_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g50860.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00260550 evm_27.TU.AmTr_v1... UV-B-induced protein At3g17800, chloroplastic... 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00021530 evm_27.TU.AmTr_v1... UV-B-induced protein At3g17800, chloroplastic... 0.04 OrthoFinder output from all 47 species
AT5G48590 No alias Protein of unknown function (DUF760) 0.07 OrthoFinder output from all 47 species
Aev_g40121 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09381 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g16629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene26673.t1 Aspi01Gene26673 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G062400.1 Ceric.14G062400 not classified & original description: pacid=50634142... 0.03 OrthoFinder output from all 47 species
Ehy_g01381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01012909001 No alias UV-B-induced protein At3g17800, chloroplastic... 0.05 OrthoFinder output from all 47 species
Len_g28395 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22589 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05706 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g27991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g19753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07521 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005487_P001 Zm00001e005487 UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e012160_P002 Zm00001e012160 UV-B-induced protein At3g17800, chloroplastic... 0.03 OrthoFinder output from all 47 species
Zm00001e041557_P002 Zm00001e041557 UV-B-induced protein At3g17800, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP HCCA
MF GO:0051743 red chlorophyll catabolite reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR008479 DUF760 138 263
No external refs found!