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Aliases : ATGRAS2, SCL14, GRAS2, LOC_Os04g50060
Description : transcription factor (GRAS)
Gene families : OG0000181 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000181_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g50060.1 | |
| Cluster | HCCA: Cluster_106 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G46600 | No alias | GRAS family transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| AT5G59450 | No alias | GRAS family transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g14981 | No alias | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g14021 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g29920 | ATGRAS2, SCL14, GRAS2 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene45526.t1 | ATGRAS2, SCL14,... | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23067 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g14499 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g16966 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g13346 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01016520001 | No alias | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01024932001 | ATGRAS2, SCL14, GRAS2 | RNA biosynthesis.transcriptional activation.GRAS... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_29764 | No alias | transcription factor (GRAS) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g08381 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11143 | No alias | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03724 | No alias | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40509 | ATGRAS2, SCL14, GRAS2 | GRAS-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g32154 | ATGRAS2, SCL14, GRAS2 | GRAS-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48422 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc05g053090.2.1 | ATGRAS2, SCL14,... | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16511 | ATGRAS2, SCL14, GRAS2 | GRAS-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g02931 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e020937_P001 | Zm00001e020937 | transcription factor (GRAS) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e020944_P001 | ATGRAS2, SCL14,... | transcription factor (GRAS) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003873 | 6-phosphofructo-2-kinase activity | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005515 | protein binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0005996 | monosaccharide metabolic process | IEP | HCCA |
| BP | GO:0006000 | fructose metabolic process | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008443 | phosphofructokinase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| MF | GO:0016301 | kinase activity | IEP | HCCA |
| BP | GO:0016567 | protein ubiquitination | IEP | HCCA |
| MF | GO:0016740 | transferase activity | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0019200 | carbohydrate kinase activity | IEP | HCCA |
| BP | GO:0019318 | hexose metabolic process | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| MF | GO:0030246 | carbohydrate binding | IEP | HCCA |
| MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| BP | GO:0032446 | protein modification by small protein conjugation | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| BP | GO:0036211 | protein modification process | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| MF | GO:2001070 | starch binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR005202 | TF_GRAS | 262 | 634 |
| No external refs found! |