LOC_Os04g49450.1 (RVE2, CIR1, LOC_Os04g49450)

Aliases : RVE2, CIR1, LOC_Os04g49450

Description : transcription factor (MYB-related)

Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g49450.1

Target	Alias	Description	ECC score	Gene Family Method
AT5G37260	RVE2, CIR1	Homeodomain-like superfamily protein	0.07	OrthoFinder output from all 47 species
Aev_g37665	RVE1	circadian clock core oscillator protein *(LHY/CCA1) &...	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000217.44	No alias	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Zm00001e007140_P003	RVE1, Zm00001e007140	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e013333_P002	RVE2, CIR1,...	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Zm00001e041379_P001	RVE1, Zm00001e041379	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0005643	nuclear pore	IEP	HCCA
BP	GO:0006913	nucleocytoplasmic transport	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
MF	GO:0017056	structural constituent of nuclear pore	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0046907	intracellular transport	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
BP	GO:0051169	nuclear transport	IEP	HCCA
BP	GO:0051641	cellular localization	IEP	HCCA
BP	GO:0051649	establishment of localization in cell	IEP	HCCA
CC	GO:0140513	nuclear protein-containing complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	59	102

External Links

No external refs found!