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  5. LOC_Os04g48950.1

LOC_Os04g48950.1 (LOC_Os04g48950)


Aliases : LOC_Os04g48950

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48950.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Adi_g045658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01808.t1 Aspi01Gene01808 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G066600.1 Ceric.21G066600 not classified & original description: pacid=50604451... 0.03 OrthoFinder output from all 47 species
GSVIVT01019725001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01030630001 No alias No description available 0.04 OrthoFinder output from all 47 species
Len_g18550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18546 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 229 491
No external refs found!