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  5. LOC_Os04g48790.1

LOC_Os04g48790.1 (LOC_Os04g48790)


Aliases : LOC_Os04g48790

Description : ROP-activating protein (RopGAP)


Gene families : OG0000915 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000915_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48790.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00129680 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT1G08340 No alias Rho GTPase activating protein with PAK-box/P21-Rho-binding domain 0.09 OrthoFinder output from all 47 species
Aev_g21440 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05258 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05032 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g25450 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05177.t1 Aspi01Gene05177 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05177.t2 Aspi01Gene05177 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07783.t1 Aspi01Gene07783 ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11538.t1 Aspi01Gene11538 ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21330.t2 Aspi01Gene21330 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34323.t1 Aspi01Gene34323 ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g025995 No alias ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g07607 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11767 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g16699 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G082200.1 Ceric.07G082200 ROP-activating protein *(RopGAP) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g05570 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06070 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033865001 No alias Multi-process regulation.Rop GTPase regulatory... 0.08 OrthoFinder output from all 47 species
LOC_Os01g73630.1 LOC_Os01g73630 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
LOC_Os02g45600.1 LOC_Os02g45600 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
LOC_Os11g05540.1 LOC_Os11g05540 ROP-activating protein (RopGAP) 0.04 OrthoFinder output from all 47 species
Len_g13298 No alias ROP-activating protein *(RopGAP) & original description: none 0.06 OrthoFinder output from all 47 species
Len_g59558 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17464 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436113g0010 No alias ROP-activating protein (RopGAP) 0.02 OrthoFinder output from all 47 species
MA_293369g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g14837 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13116 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42992 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30150 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002103 No alias ROP-activating protein *(RopGAP) & original description:... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005777 No alias ROP-activating protein *(RopGAP) & original description:... 0.04 OrthoFinder output from all 47 species
Sam_g02926 No alias ROP-activating protein *(RopGAP) & original description: none 0.03 OrthoFinder output from all 47 species
Smo13019 No alias Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
Solyc11g068520.3.1 Solyc11g068520 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
Spa_g17013 No alias ROP-activating protein *(RopGAP) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g44395 No alias ROP-activaTing protein *(RopGAP) & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007181_P002 Zm00001e007181 ROP-activating protein (RopGAP) 0.05 OrthoFinder output from all 47 species
Zm00001e018302_P003 Zm00001e018302 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Zm00001e033341_P001 Zm00001e033341 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species
Zm00001e039383_P002 Zm00001e039383 ROP-activating protein (RopGAP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000095 CRIB_dom 94 122
IPR000198 RhoGAP_dom 157 291
No external refs found!