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  5. LOC_Os04g48520.1

LOC_Os04g48520.1 (LOC_Os04g48520)


Aliases : LOC_Os04g48520

Description : peptidyl-tRNA hydrolase (VMS1)


Gene families : OG0006866 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006866_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48520.1
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Cre07.g325715 No alias No description available 0.01 OrthoFinder output from all 47 species
Zm00001e007192_P002 Zm00001e007192 peptidyl-tRNA hydrolase (VMS1) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
InterPro domains Description Start Stop
IPR041540 VATC 628 661
IPR041175 VLRF1/Vms1 219 355
No external refs found!