Aliases : AtPP2-A13, PP2-A13, LOC_Os04g48270
Description : component FBX of SCF E3 ubiquitin ligase complex
Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g48270.3 | |
Cluster | HCCA: Cluster_108 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00069p00115850 | PP2-A15,... | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
AT3G61060 | AtPP2-A13, PP2-A13 | phloem protein 2-A13 | 0.03 | OrthoFinder output from all 47 species | |
Ala_g32123 | AtPP2-B2, PP2-B2 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Aob_g29919 | PP2-A1,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aob_g33181 | PP2-B15, AtPP2-B15 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0229.g059124 | No alias | not classified & original description: CDS=133-1170 | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s2399.g111181 | No alias | not classified & original description: CDS=192-1106 | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01010614001 | PP2-A11, AtPP2-A11 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01031160001 | PP2-B15, AtPP2-B15 | F-box protein PP2-B15 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
Len_g09156 | MEE66 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10430103g0010 | AtPP2-B10, PP2-B10 | F-box protein PP2-B1 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
Nbi_g25366 | AtPP2-B12, PP2-B12 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g39207 | AtPP2-B1, PP2-B1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc04g056680.2.1 | AtPP2-B10,... | F-box protein PP2-B10 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g085490.3.1 | PP2-A15,... | component FBX of SCF E3 ubiquitin ligase complex | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e024648_P001 | AtPP2-B2,... | Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
MF | GO:0045735 | nutrient reservoir activity | IEP | HCCA |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR025886 | PP2-like | 135 | 292 |
No external refs found! |