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  5. LOC_Os04g48010.2

LOC_Os04g48010.2 (LOC_Os04g48010)


Aliases : LOC_Os04g48010

Description : COMPASS-like H3K4 histone methylase component WDR5A OS=Arabidopsis thaliana (sp|q9m2z2|wdr5a_arath : 94.4)


Gene families : OG0001278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g48010.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g036566 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026540001 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.04 OrthoFinder output from all 47 species
Pir_g43726 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0210.g025889 No alias not classified & original description: CDS=399-2942 0.02 OrthoFinder output from all 47 species
Smo110074 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g063330.4.1 Solyc07g063330 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g30658 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006528_P001 Zm00001e006528 COMPASS-like H3K4 histone methylase component WDR5B... 0.05 OrthoFinder output from all 47 species
Zm00001e007227_P001 Zm00001e007227 COMPASS-like H3K4 histone methylase component WDR5A... 0.06 OrthoFinder output from all 47 species
Zm00001e041942_P002 Zm00001e041942 COMPASS-like H3K4 histone methylase component WDR5B... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 322 357
IPR001680 WD40_repeat 226 258
IPR001680 WD40_repeat 363 400
No external refs found!