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  5. LOC_Os04g47290.2

LOC_Os04g47290.2 (LOC_Os04g47290)


Aliases : LOC_Os04g47290

Description : no hits & (original description: none)


Gene families : OG0002839 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002839_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g47290.2

Target Alias Description ECC score Gene Family Method Actions
Adi_g022517 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07518 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g19316 PDS3, PDS, PDE226 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03808 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene35673.t1 PDS3, PDS,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26743 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.25G032300.1 Ceric.25G032300 not classified & original description: pacid=50594452... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000655.47 TZ, THI4, THI1 No description available 0.07 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001302.9 PDE181, ZDS, SPC1 No description available 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020734.51 No alias 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.06 OrthoFinder output from all 47 species
Cre13.g587500 No alias Phytoene dehydrogenase, chloroplastic/chromoplastic... 0.08 OrthoFinder output from all 47 species
Dac_g13672 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g09245 PDS3, PDS, PDE226 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01023990001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_06069 LDL3 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g13429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06016 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10428599g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_580945g0010 LDL3 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Nbi_g10094 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g03292 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56449 PDS3, PDS, PDE226 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo74261 PDS3, PDS, PDE226 15-cis-phytoene desaturase, chloroplastic/chromoplastic... 0.02 OrthoFinder output from all 47 species
Spa_g29749 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13831 PDS3, PDS, PDE226 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007260_P002 Zm00001e007260 no hits & (original description: none) 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 210 435
No external refs found!