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  5. LOC_Os04g46940.1

LOC_Os04g46940.1 (HMA5, LOC_Os04g46940)


Aliases : HMA5, LOC_Os04g46940

Description : P1B-type heavy metal cation-transporting ATPase (HMA)


Gene families : OG0000698 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000698_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g46940.1
Cluster HCCA: Cluster_351

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00241570 RAN1, HMA7,... Solute transport.primary active transport.P-type ATPase... 0.03 OrthoFinder output from all 47 species
AT5G44790 RAN1, HMA7 copper-exporting ATPase / responsive-to-antagonist 1 /... 0.03 OrthoFinder output from all 47 species
Adi_g010472 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ala_g10562 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.05 OrthoFinder output from all 47 species
Aob_g26681 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Aop_g70176 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene63022.t2 HMA5, Aspi01Gene63022 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Azfi_s0132.g049263 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.07 OrthoFinder output from all 47 species
Cba_g25678 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Cba_g42619 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.08G061800.1 HMA5, Ceric.08G061800 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ceric.15G058100.1 HMA5, Ceric.15G058100 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.04 OrthoFinder output from all 47 species
Dac_g14927 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Dde_g14781 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.01 OrthoFinder output from all 47 species
Ehy_g31286 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01019769001 HMA5 Solute transport.primary active transport.P-type ATPase... 0.04 OrthoFinder output from all 47 species
LOC_Os06g45500.1 RAN1, HMA7,... P1B-type heavy metal cation-transporting ATPase (HMA) 0.03 OrthoFinder output from all 47 species
Len_g48959 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
MA_430061g0010 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.04 OrthoFinder output from all 47 species
MA_576621g0010 HMA5 P1B-type heavy metal cation-transporting ATPase (HMA) 0.02 OrthoFinder output from all 47 species
Msp_g13394 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Msp_g14910 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.05 OrthoFinder output from all 47 species
Ore_g19347 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ore_g28432 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.03 OrthoFinder output from all 47 species
Ppi_g02370 HMA5 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Smo231359 HMA5 Solute transport.primary active transport.P-type ATPase... 0.04 OrthoFinder output from all 47 species
Smo84115 HMA5 Solute transport.primary active transport.P-type ATPase... 0.02 OrthoFinder output from all 47 species
Spa_g26800 RAN1, HMA7 P1B-type heavy metal cation-transporting ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Tin_g06124 RAN1, HMA7 P1B-type heavy metal cation-transporTing ATPase *(HMA) &... 0.02 OrthoFinder output from all 47 species
Tin_g22642 HMA5 P1B-type heavy metal cation-transporTing ATPase *(HMA) &... 0.01 OrthoFinder output from all 47 species
Zm00001e007286_P002 HMA5, Zm00001e007286 P1B-type heavy metal cation-transporting ATPase (HMA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006121 HMA_dom 78 139
IPR006121 HMA_dom 246 289
IPR006121 HMA_dom 157 217
No external refs found!