LOC_Os04g46000.1 (CYCP4;1, LOC_Os04g46000)

Aliases : CYCP4;1, LOC_Os04g46000

Description : cyclin (CYCP)

Gene families : OG0000303 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000303_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g46000.1

Target	Alias	Description	ECC score	Gene Family Method
AT3G05327	No alias	Cyclin family protein	0.03	OrthoFinder output from all 47 species
Adi_g006736	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Adi_g043941	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species
Adi_g059021	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ala_g15122	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ala_g25698	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Als_g04798	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
Aob_g17833	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Aop_g37367	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Azfi_s0060.g034840	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
Ceric.09G046100.1	CYCP2;1, Ceric.09G046100	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Ceric.10G034800.1	CYCP2;1, Ceric.10G034800	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Dac_g21403	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
Dcu_g01727	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.05	OrthoFinder output from all 47 species
Dcu_g13472	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
LOC_Os10g41430.1	CYCP4;1, LOC_Os10g41430	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Len_g01157	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Len_g30865	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
MA_80306g0010	CYCP4;1	cyclin (CYCP)	0.02	OrthoFinder output from all 47 species
Ore_g24433	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Ppi_g07325	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
Ppi_g08982	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0217.g026066	cycp3;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.01	OrthoFinder output from all 47 species
Spa_g07670	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g12297	CYCP3;2	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.02	OrthoFinder output from all 47 species
Spa_g19007	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Spa_g40825	CYCP4;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.04	OrthoFinder output from all 47 species
Tin_g12466	CYCP2;1	regulatory protein *(CYCP(CYCU) of cell cycle & original...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	Interproscan
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	Interproscan
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	35	154

External Links

No external refs found!

LOC_Os04g46000.1 (CYCP4;1, LOC_Os04g46000)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation