1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g45330.1

LOC_Os04g45330.1 (AFO, YAB1, FIL, LOC_Os04g45330)


Aliases : AFO, YAB1, FIL, LOC_Os04g45330

Description : transcription factor (YABBY)


Gene families : OG0002690 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002690_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45330.1
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00029420 YAB5,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00085p00032940 AFO, YAB1, FIL,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AT1G23420 INO Plant-specific transcription factor YABBY family protein 0.04 OrthoFinder output from all 47 species
AT2G45190 AFO, YAB1, FIL Plant-specific transcription factor YABBY family protein 0.08 OrthoFinder output from all 47 species
GSVIVT01012246001 CRC RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
GSVIVT01015567001 YAB5 RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
Gb_22423 YAB5 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
MA_10432332g0010 YAB5 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Solyc01g010240.3.1 CRC, Solyc01g010240 transcription factor (YABBY) 0.02 OrthoFinder output from all 47 species
Solyc01g091010.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Solyc08g079100.3.1 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e003268_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e007412_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e012577_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.07 OrthoFinder output from all 47 species
Zm00001e015245_P002 AFO, YAB1, FIL,... transcription factor (YABBY) 0.06 OrthoFinder output from all 47 species
Zm00001e017951_P002 YAB5, Zm00001e017951 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e032845_P002 YAB2, Zm00001e032845 transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e035310_P003 AFO, YAB1, FIL,... transcription factor (YABBY) 0.03 OrthoFinder output from all 47 species
Zm00001e038717_P002 CRC, Zm00001e038717 transcription factor (YABBY) 0.05 OrthoFinder output from all 47 species
Zm00001e041322_P001 AFO, YAB1, FIL,... transcription factor (YABBY) 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007275 multicellular organism development IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006780 YABBY 27 218
No external refs found!