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  5. LOC_Os04g45070.1

LOC_Os04g45070.1 (LOC_Os04g45070)


Aliases : LOC_Os04g45070

Description : Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 95.9)


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45070.1

Target Alias Description ECC score Gene Family Method Actions
AT2G45820 No alias Remorin family protein 0.03 OrthoFinder output from all 47 species
Aev_g25241 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10148 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene40812.t2 Aspi01Gene40812 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0528.g075784 No alias not classified & original description: CDS=146-685 0.04 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_30702 No alias no description available(sp|q9ffa5|rmr14_arath : 131.0) 0.03 OrthoFinder output from all 47 species
Len_g05082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g08631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g05258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g094370.3.1 Solyc01g094370 Uncharacterized protein At3g61260 OS=Arabidopsis... 0.09 OrthoFinder output from all 47 species
Solyc06g035910.1.1 Solyc06g035910 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g12663 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007421_P001 Zm00001e007421 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 91.3) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 94 199
IPR005518 Remorin_N 30 90
No external refs found!