1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g45060.1

LOC_Os04g45060.1 (AtMYB17, MYB17, LOC_Os04g45060)


Aliases : AtMYB17, MYB17, LOC_Os04g45060

Description : transcription factor (MYB)


Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g45060.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00224470 MYB3, ATMYB3,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00024p00225650 MYB114,... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AMTR_s00048p00210040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
AMTR_s00049p00074250 AtMYB20, MYB20,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
AT1G09540 ATMYB61, MYB61 myb domain protein 61 0.03 OrthoFinder output from all 47 species
AT1G66230 AtMYB20, MYB20 myb domain protein 20 0.05 OrthoFinder output from all 47 species
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 OrthoFinder output from all 47 species
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.02 OrthoFinder output from all 47 species
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.03 OrthoFinder output from all 47 species
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 OrthoFinder output from all 47 species
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.02 OrthoFinder output from all 47 species
AT5G15310 ATMIXTA, MYB16, ATMYB16 myb domain protein 16 0.03 OrthoFinder output from all 47 species
AT5G35550 MYB123,... Duplicated homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g02388 ATMIXTA, MYB16, ATMYB16 MYB class-R2R3 subgroup-8 transcription factor &... 0.02 OrthoFinder output from all 47 species
Ala_g11169 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23424 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g05304 MYB86, ATMYB86 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g20969 ATY53, ATMYB67, MYB67 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene16340.t1 ATMIXTA, MYB16,... MYB class-R2R3 subgroup-8 transcription factor &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene35499.t1 AtMYB50, MYB50,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G036000.1 ATMIXTA, MYB16,... not classified & original description: pacid=50622981... 0.02 OrthoFinder output from all 47 species
Dcu_g21726 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43510 ATMIXTA, MYB16, ATMYB16 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01008090001 ATMYB35, TDF1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01014770001 MYB103,... RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01026868001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01028981001 AtMYB17, MYB17 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01029904001 MYB60, AtMYB60 RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
GSVIVT01032564001 ATMYB35, TDF1 RNA biosynthesis.transcriptional activation.MYB... 0.02 OrthoFinder output from all 47 species
GSVIVT01035332001 MYB84, RAX3, ATMYB84 RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Gb_00379 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Gb_02422 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Gb_23693 AtMYB53, MYB53 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g50720.1 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
LOC_Os01g51260.1 ATY53, ATMYB67,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g04900.1 MYB305, ATMYB71,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
LOC_Os08g15020.1 MYB36, AtMYB36,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
LOC_Os09g36730.1 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_10157944g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_137453g0010 AtMYB17, MYB17 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_179894g0010 ATMYB12, PFG1, MYB12 transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
MA_214345g0020 MYB41, AtMYB41 transcription factor (MYB) 0.07 OrthoFinder output from all 47 species
MA_223201g0010 ATMYB4, MYB4 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_55123g0010 ATMYB4, MYB4 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
MA_83918g0010 AtMYB17, MYB17 transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
MA_9483804g0010 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
MA_95012g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g09420.1 ATMIXTA, MYB16, ATMYB16 transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Mp2g22560.1 MYB86, ATMYB86 transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Msp_g19683 MYB76, AtMYB76 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63855 ATMYB46, MYB46 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g03861 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g37504 No alias transcriptional regulator *(MS188) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014470.3.1 AtMYB20, MYB20,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Solyc06g073640.4.1 ATMYB65, MYB65,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Solyc10g005760.3.1 MYB103,... transcription factor (MYB). transcriptional key... 0.02 OrthoFinder output from all 47 species
Solyc12g008670.2.1 ATMYB38, MYB38,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Solyc12g099140.2.1 BOS1, AtMYB108,... transcription factor (MYB) 0.05 OrthoFinder output from all 47 species
Spa_g52191 MYB86, ATMYB86 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g08063 ATMYB61, MYB61 MYB class-R2R3 subgroup-13 transcription factor &... 0.03 OrthoFinder output from all 47 species
Tin_g18882 AtMYB50, MYB50 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28409 MYB86, ATMYB86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001399_P001 ATMYB12, PFG1,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e004140_P002 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e007904_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e014925_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e019110_P001 MYB6, AtMYB6,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e022450_P001 ATMIXTA, MYB16,... transcription factor (MYB) 0.04 OrthoFinder output from all 47 species
Zm00001e028653_P001 ATMYB4, MYB4,... transcription factor (MYB) 0.03 OrthoFinder output from all 47 species
Zm00001e035652_P001 MYB86, ATMYB86,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species
Zm00001e037956_P001 ATMYB94,... transcription factor (MYB) 0.06 OrthoFinder output from all 47 species
Zm00001e039235_P001 MYB60, AtMYB60,... transcription factor (MYB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 67 110
IPR001005 SANT/Myb 14 61
No external refs found!