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Aliases : LOC_Os04g44500
Description : GEM-like protein 4 OS=Arabidopsis thaliana (sp|q9fta0|geml4_arath : 182.0)
Gene families : OG0000595 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000595_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g44500.1 | |
| Cluster | HCCA: Cluster_112 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g006517 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g018708 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g04501 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g44510.1 | LOC_Os04g44510 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g29400.1 | LOC_Os12g29400 | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| MA_20704g0010 | No alias | GEM-like protein 5 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g38114 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g008970.3.1 | Solyc04g008970 | Putative GEM-like protein 8 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc11g011580.2.1 | Solyc11g011580 | Putative GEM-like protein 8 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g05449 | FIP1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g22675 | FIP1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e012085_P001 | FIP1, Zm00001e012085 | GLABRA2 expression modulator OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e015212_P001 | Zm00001e015212 | GEM-like protein 6 OS=Arabidopsis thaliana... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023068_P001 | Zm00001e023068 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041280_P002 | Zm00001e041280 | GEM-like protein 4 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| MF | GO:0008081 | phosphoric diester hydrolase activity | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| MF | GO:0042578 | phosphoric ester hydrolase activity | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004182 | GRAM | 113 | 230 |
| No external refs found! |