LOC_Os04g43160.1 (LOC_Os04g43160)


Aliases : LOC_Os04g43160

Description : no hits & (original description: none)


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g43160.1
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
Adi_g106428 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106429 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22337 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g62585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0361.g066884 No alias not classified & original description: CDS=167-1051 0.02 OrthoFinder output from all 47 species
Dcu_g33575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013133001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01027919001 TPR4 No description available 0.03 OrthoFinder output from all 47 species
Len_g07891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426506g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10430686g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_13355g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_8474388g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Ore_g44971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003146 No alias not classified & original description: CDS=1-1278 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0056.g014588 No alias not classified & original description: CDS=1-879 0.03 OrthoFinder output from all 47 species
Solyc06g068130.3.1 Solyc06g068130 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc07g008210.4.1 Solyc07g008210 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g12184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!