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  5. LOC_Os04g42670.1

LOC_Os04g42670.1 (VFB4, SKIP2, LOC_Os04g42670)


Aliases : VFB4, SKIP2, LOC_Os04g42670

Description : component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001029 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001029_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42670.1

Target Alias Description ECC score Gene Family Method Actions
AT3G50080 VFB2 VIER F-box proteine 2 0.03 OrthoFinder output from all 47 species
Adi_g011567 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Adi_g036582 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g058887 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Adi_g109116 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011701 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Cba_g03240 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021795.8 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g05676 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ehy_g04766 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Gb_13260 VFB3 component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
Lfl_g03217 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Msp_g03956 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Nbi_g06190 VFB4, SKIP2 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Pir_g19535 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012208 VFB1 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016647 VFB3 substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g27331 No alias substrate adaptor *(VFB) of SCF E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Zm00001e041189_P001 VFB4, SKIP2,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 74 107
No external refs found!