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  5. LOC_Os04g42470.1

LOC_Os04g42470.1 (LOC_Os04g42470)


Aliases : LOC_Os04g42470

Description : no hits & (original description: none)


Gene families : OG0003094 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003094_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42470.1

Target Alias Description ECC score Gene Family Method Actions
Als_g28490 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0161.g054092 No alias not classified & original description: CDS=680-2425 0.04 OrthoFinder output from all 47 species
Ceric.32G023300.1 Ceric.32G023300 not classified & original description: pacid=50598324... 0.02 OrthoFinder output from all 47 species
Len_g31325 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g15696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo419616 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g117420.4.1 Solyc03g117420 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007650_P002 Zm00001e007650 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 402 423
IPR001611 Leu-rich_rpt 355 374
IPR001611 Leu-rich_rpt 233 292
No external refs found!