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  5. LOC_Os04g42330.1

LOC_Os04g42330.1 (LOC_Os04g42330)


Aliases : LOC_Os04g42330

Description : component GCP2 of gamma-Tubulin ring complex (gamma-TuRC)


Gene families : OG0004097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004097_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g42330.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g04802 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54769.t1 Aspi01Gene54769 component *(GCP2) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000545.28 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.01 OrthoFinder output from all 47 species
GSVIVT01032444001 No alias Cytoskeleton.microtubular network.microtubule Tubulin... 0.08 OrthoFinder output from all 47 species
Lfl_g02177 No alias component *(GCP2) of gamma-Tubulin ring complex &... 0.02 OrthoFinder output from all 47 species
Mp1g08820.1 No alias component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Solyc02g081460.4.1 Solyc02g081460 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.03 OrthoFinder output from all 47 species
Zm00001e041169_P001 Zm00001e041169 component GCP2 of gamma-Tubulin ring complex (gamma-TuRC) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043015 gamma-tubulin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR041470 GCP_N 71 362
IPR040457 GCP_C 365 700
No external refs found!