LOC_Os04g41900.1 (LOC_Os04g41900)


Aliases : LOC_Os04g41900

Description : no hits & (original description: none)


Gene families : OG0004370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004370_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g41900.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00160870 evm_27.TU.AmTr_v1... No description available 0.13 OrthoFinder output from all 47 species
AT3G02640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.15 OrthoFinder output from all 47 species
AT5G16250 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 OrthoFinder output from all 47 species
AT5G36710 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.15 OrthoFinder output from all 47 species
AT5G36800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.15 OrthoFinder output from all 47 species
Aev_g22298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g32668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04668 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g07436 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene13483.t1 Aspi01Gene13483 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46914.t1 Aspi01Gene46914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67581.t1 Aspi01Gene67581 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene67582.t1 Aspi01Gene67582 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G015700.1 Ceric.28G015700 not classified & original description: pacid=50570153... 0.05 OrthoFinder output from all 47 species
Dac_g14615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00561 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05252 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01007183001 No alias No description available 0.11 OrthoFinder output from all 47 species
Gb_21178 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00262 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Len_g07623 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g31204 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
MA_488033g0010 No alias no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Msp_g04591 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Nbi_g39588 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Ore_g17372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00575 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc05g055680.4.1 Solyc05g055680 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g041770.1.1 Solyc07g041770 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g25154 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g46205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007700_P001 Zm00001e007700 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
Zm00001e018978_P001 Zm00001e018978 no hits & (original description: none) 0.18 OrthoFinder output from all 47 species
Zm00001e028566_P001 Zm00001e028566 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Zm00001e032081_P001 Zm00001e032081 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species
Zm00001e041147_P001 Zm00001e041147 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!