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Aliases : LOC_Os04g41570
Description : transcription factor (bHLH)
Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: LOC_Os04g41570.2 | |
| Cluster | HCCA: Cluster_8 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00167p00019840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G31050 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT1G61660 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G20640 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G29100 | No alias | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g30685 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g14362 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Als_g21207 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene00926.t1 | Aspi01Gene00926 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene54673.t1 | Aspi01Gene54673 | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene71895.t1 | Aspi01Gene71895 | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Cba_g33477 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.32G036000.1 | Ceric.32G036000 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.33G028900.1 | Ceric.33G028900 | bHLH-type transcription factor & original description:... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.33G029000.1 | Ceric.33G029000 | not classified & original description: pacid=50607112... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g33543 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g37245 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g04923 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g25638 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01005301001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01014542001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016594001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01038142001 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_06063 | No alias | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_07584 | No alias | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Gb_40387 | No alias | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Lfl_g10359 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Mp2g19970.1 | No alias | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Msp_g15621 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Nbi_g27626 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g39581 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pnu_g09411 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g13014 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05050 | No alias | bHLH-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Sam_g16504 | No alias | bHLH-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16505 | No alias | bHLH-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo117274 | No alias | RNA biosynthesis.transcriptional activation.bHLH... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc02g079760.3.1 | Solyc02g079760 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g084880.3.1 | Solyc02g084880 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc04g080710.4.1 | Solyc04g080710 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc06g066580.4.1 | Solyc06g066580 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g006640.3.1 | Solyc10g006640 | transcription factor (bHLH) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e010350_P001 | Zm00001e010350 | transcription factor (bHLH) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e016395_P001 | Zm00001e016395 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e032055_P001 | Zm00001e032055 | transcription factor (bHLH) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e034854_P002 | Zm00001e034854 | transcription factor (bHLH) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004652 | polynucleotide adenylyltransferase activity | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043631 | RNA polyadenylation | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| MF | GO:0070566 | adenylyltransferase activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |