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  5. LOC_Os04g40560.1

LOC_Os04g40560.1 (LOC_Os04g40560)


Aliases : LOC_Os04g40560

Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 115.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40560.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00256130 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g23331 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_3692384g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g17162 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55944 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005956 No alias not classified & original description: CDS=1-1941 0.02 OrthoFinder output from all 47 species
Zm00001e018669_P001 Zm00001e018669 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 364 401
IPR001680 WD40_repeat 316 351
IPR001680 WD40_repeat 412 463
IPR001680 WD40_repeat 222 251
IPR001680 WD40_repeat 257 292
No external refs found!