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  5. LOC_Os04g40530.1

LOC_Os04g40530.1 (LOC_Os04g40530)


Aliases : LOC_Os04g40530

Description : no hits & (original description: none)


Gene families : OG0002741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002741_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40530.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT3G01660 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
AT4G29590 No alias S-adenosyl-L-methionine-dependent methyltransferases... 0.03 OrthoFinder output from all 47 species
Ala_g04910 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g18185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001208.13 No alias No description available 0.03 OrthoFinder output from all 47 species
Dac_g04986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15290 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g10297 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032364001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_10435778g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g15015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19839 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06365 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g48096 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc07g025520.3.1 Solyc07g025520 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g29605 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e007793_P001 Zm00001e007793 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008168 methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR013216 Methyltransf_11 131 181
No external refs found!