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  5. LOC_Os04g40070.1

LOC_Os04g40070.1 (LOC_Os04g40070)


Aliases : LOC_Os04g40070

Description : C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis thaliana (sp|q9fgs8|c2gr2_arath : 766.0)


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g40070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00208380 evm_27.TU.AmTr_v1... C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
AT1G03370 No alias C2 calcium/lipid-binding and GRAM domain containing protein 0.03 OrthoFinder output from all 47 species
Azfi_s0310.g064152 No alias not classified & original description: CDS=1-2253 0.03 OrthoFinder output from all 47 species
Msp_g27073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g21493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29594 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e007814_P001 Zm00001e007814 C2 and GRAM domain-containing protein At5g50170... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 372 437
IPR000008 C2_dom 218 318
IPR031968 VASt 2 85
IPR031968 VASt 539 681
No external refs found!