LOC_Os08g27150 (Os08g0360100)


Aliases : Os08g0360100

Description : 27.1.1 RNA.processing.splicing ortholog of maize chloroplast splicing factor CRS1 (CRS1)


Gene families : OG_01_0000682 (Gene family) Phylogenetic Tree(s): OG0000682_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g27150
Cluster HCCA cluster: Cluster_126

Target Alias Description ECC score Gene Family Method Actions
AT3G01370 ATCFM2, CFM2 CRM family member 2 0.04 Gene family
AT3G18390 EMB1865 CRS1 / YhbY (CRM) domain-containing protein 0.04 Gene family
AT3G23070 ATCFM3A, CFM3A CRM family member 3A 0.02 Gene family
AT4G14510 ATCFM3B, CFM3B CRM family member 3B 0.02 Gene family
AT4G29750 No alias CRS1 / YhbY (CRM) domain-containing protein 0.03 Gene family
GSVIVT01008296001 No alias 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.03 Gene family
GSVIVT01018109001 No alias 35.2 not assigned.unknown Encodes a CRM domain protein... 0.04 Gene family
GSVIVT01031001001 No alias 27.1.1 RNA.processing.splicing ortholog of maize... 0.05 Gene family
GSVIVT01032542001 No alias 35.2 not assigned.unknown Encodes a protein containing a... 0.03 Gene family
MA_8161870g0010 No alias 35.2 not assigned.unknown Encodes a protein containing a... 0.02 Gene family
Smo120007 PACid_15411575 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.02 Gene family
Smo412905 PACid_15415336 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.01 Gene family
Solyc03g119450.3.1 Solyc03g119450.3 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.03 Gene family
Solyc07g039500.3.1 Solyc07g039500.3 No description available 0.03 Gene family
Solyc09g083350.3.1 Solyc09g083350.3 35.2 not assigned.unknown Encodes a CRM domain protein... 0.05 Gene family
Zm00001d020230 GRMZM2G142740 35.2 not assigned.unknown CRS1 / YhbY (CRM)... 0.02 Gene family
Zm00001d038922 GRMZM5G813259 33.99 development.unspecified embryo defective 1865 (EMB1865) 0.05 Gene family

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 582 669
IPR001890 RNA-binding_CRM 171 255
IPR001890 RNA-binding_CRM 371 454
No external refs found!