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  5. LOC_Os04g39680.1

LOC_Os04g39680.1 (LOC_Os04g39680)


Aliases : LOC_Os04g39680

Description : FT-interacting protein 1 OS=Arabidopsis thaliana (sp|q9fl59|ftip1_arath : 777.0)


Gene families : OG0000234 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000234_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39680.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00091660 evm_27.TU.AmTr_v1... Protein QUIRKY OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AT4G11610 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.02 OrthoFinder output from all 47 species
AT5G17980 No alias C2 calcium/lipid-binding plant phosphoribosyltransferase... 0.06 OrthoFinder output from all 47 species
Als_g31975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49124 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10498.t1 Aspi01Gene10498 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013224 No alias not classified & original description: CDS=1-3375 0.03 OrthoFinder output from all 47 species
Dcu_g25894 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_33902 No alias no description available(sp|q60ew9|ftip7_orysj : 1244.0) 0.02 OrthoFinder output from all 47 species
Gb_34570 No alias no description available(sp|q9m2r0|ftip3_arath : 1276.0) 0.02 OrthoFinder output from all 47 species
LOC_Os02g44490.1 LOC_Os02g44490 no description available(sp|q9m2r0|ftip3_arath : 717.0) 0.05 OrthoFinder output from all 47 species
LOC_Os03g44890.1 LOC_Os03g44890 no description available(sp|q9m2r0|ftip3_arath : 732.0) 0.04 OrthoFinder output from all 47 species
LOC_Os06g41090.1 LOC_Os06g41090 no description available(sp|q69t22|ftip1_orysj : 1449.0) 0.03 OrthoFinder output from all 47 species
MA_80358g0010 No alias no description available(sp|q60ew9|ftip7_orysj : 423.0) 0.02 OrthoFinder output from all 47 species
MA_80358g0020 No alias no description available(sp|q9m2r0|ftip3_arath : 704.0) 0.04 OrthoFinder output from all 47 species
Ppi_g32772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011519 No alias not classified & original description: CDS=1-3069 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0211.g025914 No alias not classified & original description: CDS=1-2928 0.03 OrthoFinder output from all 47 species
Solyc01g006620.3.1 Solyc01g006620 no description available(sp|q9m2r0|ftip3_arath : 1132.0) 0.04 OrthoFinder output from all 47 species
Solyc01g094410.3.1 Solyc01g094410 no description available(sp|q9m2r0|ftip3_arath : 1084.0) 0.04 OrthoFinder output from all 47 species
Solyc03g077920.1.1 Solyc03g077920 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g113190.1.1 QKY, Solyc03g113190 Protein QUIRKY OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g18875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g21398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g27640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007510_P001 Zm00001e007510 no description available(sp|q9m2r0|ftip3_arath : 1014.0) 0.03 OrthoFinder output from all 47 species
Zm00001e007829_P001 Zm00001e007829 FT-interacting protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e023184_P001 Zm00001e023184 no description available(sp|q9m2r0|ftip3_arath : 827.0) 0.04 OrthoFinder output from all 47 species
Zm00001e024540_P001 Zm00001e024540 no description available(sp|q60ew9|ftip7_orysj : 170.0) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016887 ATP hydrolysis activity IEP HCCA
InterPro domains Description Start Stop
IPR013583 PRibTrfase_C 700 855
IPR000008 C2_dom 444 553
IPR000008 C2_dom 267 365
IPR000008 C2_dom 91 201
No external refs found!