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  5. LOC_Os04g39610.1

LOC_Os04g39610.1 (GPDL2, SHV3, MRH5,...)


Aliases : GPDL2, SHV3, MRH5, LOC_Os04g39610

Description : Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana (sp|q9fj62|gpdl4_arath : 730.0)


Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g39610.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00174750 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.03 OrthoFinder output from all 47 species
AMTR_s00252p00015420 SVL4,... Glycerophosphodiester phosphodiesterase GDPDL6... 0.04 OrthoFinder output from all 47 species
AT4G26690 GPDL2, SHV3, MRH5 PLC-like phosphodiesterase family protein 0.04 OrthoFinder output from all 47 species
Aev_g15087 GPDL2, SHV3, MRH5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g40029 GPDL2, SHV3, MRH5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g02157 SVL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08832 SVL4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35833.t1 SVL5, Aspi01Gene35833 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0064.g035674 SVL5 not classified & original description: CDS=1-2358 0.04 OrthoFinder output from all 47 species
Ceric.08G056600.1 SVL5, Ceric.08G056600 not classified & original description: pacid=50637619... 0.04 OrthoFinder output from all 47 species
Dac_g31142 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g15330 GPDL2, SHV3, MRH5 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g07994 SVL4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003731001 SVL5 Glycerophosphodiester phosphodiesterase GDPDL6... 0.03 OrthoFinder output from all 47 species
Gb_18319 SVL1 Glycerophosphodiester phosphodiesterase GDPDL4... 0.05 OrthoFinder output from all 47 species
LOC_Os02g09450.1 SVL5, LOC_Os02g09450 Glycerophosphodiester phosphodiesterase GDPDL7... 0.04 OrthoFinder output from all 47 species
Lfl_g20356 SVL2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10434415g0020 SNC4 Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4... 0.03 OrthoFinder output from all 47 species
Msp_g26126 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g26745 SVL5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g40805 SVL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05893 SVL5 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g17680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g014490.4.1 SVL4, Solyc02g014490 Glycerophosphodiester phosphodiesterase GDPDL7... 0.03 OrthoFinder output from all 47 species
Solyc02g014530.4.1 SVL4, Solyc02g014530 Glycerophosphodiester phosphodiesterase GDPDL6... 0.02 OrthoFinder output from all 47 species
Solyc07g065120.3.1 SVL1, Solyc07g065120 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
Zm00001e014970_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.05 OrthoFinder output from all 47 species
Zm00001e022839_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.05 OrthoFinder output from all 47 species
Zm00001e025069_P001 SVL5, Zm00001e025069 Glycerophosphodiester phosphodiesterase GDPDL7... 0.04 OrthoFinder output from all 47 species
Zm00001e035558_P002 SVL1, Zm00001e035558 Glycerophosphodiester phosphodiesterase GDPDL4... 0.03 OrthoFinder output from all 47 species
Zm00001e041063_P001 GPDL2, SHV3,... Glycerophosphodiester phosphodiesterase GDPDL3... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0008081 phosphoric diester hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
InterPro domains Description Start Stop
IPR030395 GP_PDE_dom 357 648
No external refs found!