LOC_Os04g39460.1 (RPS2, LOC_Os04g39460)

Aliases : RPS2, LOC_Os04g39460

Description : Disease resistance protein RPS2 OS=Arabidopsis thaliana (sp|q42484|rps2_arath : 365.0)

Gene families : OG0000196 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000196_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g39460.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00104p00152930	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
Adi_g082458	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g18971	ADR1-L2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015167001	RPS2	Disease resistance protein RPS2 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Lfl_g23441	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
MA_10426937g0010	No alias	Probable disease resistance protein At5g63020...	0.03	OrthoFinder output from all 47 species
MA_164516g0010	No alias	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
MA_399969g0010	No alias	Disease resistance protein RPS5 OS=Arabidopsis thaliana...	0.05	OrthoFinder output from all 47 species
MA_562728g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc08g005500.4.1	Solyc08g005500	Putative late blight resistance protein homolog R1A-6...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	148	366
IPR001611	Leu-rich_rpt	521	577

External Links

No external refs found!