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LOC_Os04g38390.1 (LOC_Os04g38390)


Aliases : LOC_Os04g38390

Description : PLAT domain-containing protein 1 OS=Arabidopsis thaliana (sp|o65660|plat1_arath : 176.0)


Gene families : OG0003401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g38390.1

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005877001 No alias PLAT domain-containing protein 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
MA_132224g0010 No alias PLAT domain-containing protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g09875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g24990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13131 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g093360.3.1 Solyc03g093360 PLAT domain-containing protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g096460.4.1 Solyc03g096460 PLAT domain-containing protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g096540.3.1 Solyc03g096540 PLAT domain-containing protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g096545.1.1 Solyc03g096545 PLAT domain-containing protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0043631 RNA polyadenylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR001024 PLAT/LH2_dom 47 165
No external refs found!