LOC_Os04g37520.1 (LOC_Os04g37520)


Aliases : LOC_Os04g37520

Description : no hits & (original description: none)


Gene families : OG0001186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g37520.1

Target Alias Description ECC score Gene Family Method Actions
AT1G50630 No alias Protein of unknown function (DUF3537) 0.02 OrthoFinder output from all 47 species
Adi_g054119 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G054100.1 Ceric.09G054100 not classified & original description: pacid=50588225... 0.04 OrthoFinder output from all 47 species
Ceric.33G013800.1 Ceric.33G013800 not classified & original description: pacid=50606974... 0.02 OrthoFinder output from all 47 species
Dcu_g11761 MRB1, ATMRB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035570001 No alias No description available 0.04 OrthoFinder output from all 47 species
MA_10435524g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14743g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_38632g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g08813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g20805 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0023.g008894 No alias not classified & original description: CDS=130-1383 0.02 OrthoFinder output from all 47 species
Solyc10g006120.2.1 Solyc10g006120 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e007979_P001 Zm00001e007979 no hits & (original description: none) 0.19 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR021924 DUF3537 38 426
No external refs found!