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  5. LOC_Os04g35540.1

LOC_Os04g35540.1 (BAT1, LOC_Os04g35540)


Aliases : BAT1, LOC_Os04g35540

Description : gamma-aminobutyric acid transporter (GABP)


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g35540.1

Target Alias Description ECC score Gene Family Method Actions
AT2G01170 BAT1 bidirectional amino acid transporter 1 0.07 OrthoFinder output from all 47 species
Adi_g011899 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.01 OrthoFinder output from all 47 species
Ala_g04214 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Als_g19974 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Als_g24664 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aob_g15728 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.11G027600.1 BAT1, Ceric.11G027600 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Dac_g39810 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10638 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Gb_38309 BAT1 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Lfl_g08480 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g11840 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
MA_10003545g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
MA_10426763g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_6210082g0010 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g06265 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Msp_g27472 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g10534 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.06 OrthoFinder output from all 47 species
Pir_g12154 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.04 OrthoFinder output from all 47 species
Tin_g08154 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 29 486
No external refs found!