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  5. LOC_Os04g33820.1

LOC_Os04g33820.1 (LOC_Os04g33820)


Aliases : LOC_Os04g33820

Description : Probable F-box protein At2g36090 OS=Arabidopsis thaliana (sp|q9sih5|fb322_arath : 136.0)


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g33820.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00055630 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00114p00120290 evm_27.TU.AmTr_v1... Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
AMTR_s00167p00079760 SLY1,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AT2G36090 No alias F-box family protein 0.03 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ala_g01481 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Als_g26981 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g07109 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene24799.t1 Aspi01Gene24799 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.06 OrthoFinder output from all 47 species
Cba_g22907 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ceric.05G080600.1 Ceric.05G080600 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Ceric.05G080700.1 Ceric.05G080700 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
GSVIVT01011119001 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os03g24230.1 LOC_Os03g24230 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g06030.1 LOC_Os12g06030 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_10432992g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.06 OrthoFinder output from all 47 species
MA_119267g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.05 OrthoFinder output from all 47 species
MA_146085g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_152693g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.07 OrthoFinder output from all 47 species
MA_196364g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.06 OrthoFinder output from all 47 species
MA_233275g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
MA_3236g0010 SLY2 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
MA_6307607g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g28804 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g32241 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.05 OrthoFinder output from all 47 species
Solyc04g078390.3.1 SLY1, Solyc04g078390 SLY-type gibberellin signal transducer. component F-box... 0.03 OrthoFinder output from all 47 species
Solyc10g083230.1.1 Solyc10g083230 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Solyc11g068710.3.1 Solyc11g068710 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e000792_P001 SLY2, Zm00001e000792 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!