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Aliases : AFB2, LOC_Os04g32460
Description : component TIR1/AFB of auxin receptor complex. component FBX of SCF E3 ubiquitin ligase complex
Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00016p00126140 | AFB2,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g112625 | AFB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11817 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g03491 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g03539 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g13268 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene00665.t1 | AFB2, Aspi01Gene00665 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g02651 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g03282 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.06 | OrthoFinder output from all 47 species | |
| Cba_g04056 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g33251 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45655 | AFB2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.02G101000.1 | AFB2, Ceric.02G101000 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z143900.1 | COI1, Ceric.1Z143900 | not classified & original description: pacid=50567868... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.1Z144000.1 | COI1, Ceric.1Z144000 | component *(COI) of jasmonic acid receptor complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g10385 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g24014 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g24015 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g03379 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g04782 | AFB3 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g02465 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g01449 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g04343 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g08346 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10590 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g04476 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g26263 | TIR1 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g01007 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02288 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g15701 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0044.g013019 | AFB2 | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05124 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g24051 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g27933 | No alias | substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g44971 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g05740 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18002 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g22095 | COI1 | component *(COI) of jasmonic acid receptor complex &... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g26581 | COI1 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000649_P001 | Zm00001e000649 | component TIR1/AFB of auxin receptor complex. component... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e015908_P001 | Zm00001e015908 | component TIR1/AFB of auxin receptor complex. component... | 0.08 | OrthoFinder output from all 47 species | |
| Zm00001e023831_P001 | Zm00001e023831 | component TIR1/AFB of auxin receptor complex. component... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e027505_P001 | TIR1, Zm00001e027505 | component TIR1/AFB of auxin receptor complex. component... | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e028730_P001 | COI1, Zm00001e028730 | component COI of jasmonic acid receptor complex | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038839_P001 | AFB5, Zm00001e038839 | component TIR1/AFB of auxin receptor complex. component... | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003909 | DNA ligase activity | IEP | HCCA |
| MF | GO:0003910 | DNA ligase (ATP) activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006310 | DNA recombination | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| MF | GO:0016874 | ligase activity | IEP | HCCA |
| MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| No external refs found! |