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  5. LOC_Os04g32270.1

LOC_Os04g32270.1 (ATGP4, LOC_Os04g32270)


Aliases : ATGP4, LOC_Os04g32270

Description : ubiquitin-fold protein (MUB)


Gene families : OG0001418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001418_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g32270.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
Adi_g022557 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36903 MUB6 MUB ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Cre06.g260400 No alias Protein degradation.peptide... 0.02 OrthoFinder output from all 47 species
GSVIVT01008590001 ATGP4 Protein degradation.peptide... 0.03 OrthoFinder output from all 47 species
MA_30032g0010 MUB6 ubiquitin-fold protein (MUB) 0.03 OrthoFinder output from all 47 species
MA_56326g0010 MUB5 ubiquitin-fold protein (MUB) 0.03 OrthoFinder output from all 47 species
Ore_g16885 MUB6 MUB ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR039540 UBL3-like_ubiquitin_dom 21 133
No external refs found!