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  5. LOC_Os02g09480.1

LOC_Os02g09480.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000157 (SeedPlants) Phylogenetic Tree(s): OG_03_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os02g09480.1
Cluster HCCA: Cluster_215

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00037p00177500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.06 Archaeplastida
AT2G23290 MYB70, AtMYB70 myb domain protein 70 0.03 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G11440 ATMYB65, MYB65 myb domain protein 65 0.03 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.02 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.02 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.04 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.03 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.07 Archaeplastida
AT5G16770 MYB9, AtMYB9 myb domain protein 9 0.03 Archaeplastida
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.03 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 Archaeplastida
GSVIVT01000219001 No alias No description available 0.03 Archaeplastida
GSVIVT01000450001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01008401001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01015102001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020038001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01027810001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01032467001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_09998 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os07g43580.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10431610g0040 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_10434028g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_175772g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_230300g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_298677g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_30864g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_315620g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_84507g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8626g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_87695g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_95339g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.04 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.05 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_42920V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.04 Archaeplastida
Pp3c8_16720V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g087960.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g078420.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g014290.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc06g074910.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc10g005460.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e041239_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 LandPlants
AT5G17800 MYB56, AtMYB56 myb domain protein 56 0.02 LandPlants
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.03 LandPlants
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Gb_35820 No alias transcription factor (MYB) 0.03 LandPlants
Pp3c1_1650V3.1 No alias myb domain protein 105 0.05 LandPlants
Pp3c20_8950V3.1 No alias myb domain protein r1 0.02 LandPlants
Pp3c7_21220V3.1 No alias myb domain protein 105 0.02 LandPlants
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.03 LandPlants
Solyc04g078420.1.1 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e030480_P001 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 LandPlants
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
AT3G50060 MYB77 myb domain protein 77 0.02 SeedPlants
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.02 SeedPlants
GSVIVT01009424001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
Gb_24073 No alias transcription factor (MYB) 0.03 SeedPlants
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.04 SeedPlants
Zm00001e030480_P001 No alias transcription factor (MYB) 0.04 SeedPlants
Zm00001e037510_P001 No alias transcription factor (MYB) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 11 56
IPR001005 SANT/Myb 63 106
No external refs found!