LOC_Os04g30860.1 (LOC_Os04g30860)

Aliases : LOC_Os04g30860

Description : no hits & (original description: none)

Gene families : OG0009544 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009544_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g30860.1
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g64220.1	ULP1A, ELS1,...	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os04g25680.1	LOC_Os04g25680	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
LOC_Os07g01280.1	LOC_Os07g01280	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
LOC_Os07g13010.1	LOC_Os07g13010	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
BP	GO:0006508	proteolysis	IEA	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005985	sucrose metabolic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
MF	GO:0016157	sucrose synthase activity	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
MF	GO:0035251	UDP-glucosyltransferase activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0046527	glucosyltransferase activity	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003653	Peptidase_C48_C	800	947

External Links

No external refs found!