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  5. LOC_Os04g30790.1

LOC_Os04g30790.1 (XRI1, XRI, LOC_Os04g30790)


Aliases : XRI1, XRI, LOC_Os04g30790

Description : Protein XRI1 OS=Arabidopsis thaliana (sp|q6nlw5|xri1_arath : 85.5)


Gene families : OG0001646 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001646_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g30790.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00087p00169870 XRI1, XRI,... Protein XRI1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g024715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g10830.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g42853 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24680 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e008413_P002 XRI1, XRI, Zm00001e008413 Protein XRI1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e040712_P004 XRI1, XRI, Zm00001e040712 Protein XRI1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006658 phosphatidylserine metabolic process IEP HCCA
BP GO:0006659 phosphatidylserine biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!