LOC_Os04g30430.1 (LOC_Os04g30430)


Aliases : LOC_Os04g30430

Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000432 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g30430.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT5G60980 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.04 OrthoFinder output from all 47 species
Adi_g079968 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03861 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25747 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50035 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g11149 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g010768 No alias mRNA endoribonuclease *(G3BP) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g10558 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05948 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10216 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008107001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_10429469g0010 No alias mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Mp4g17080.1 No alias mRNA endoribonuclease (G3BP) 0.02 OrthoFinder output from all 47 species
Msp_g07609 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35838 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g00985 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c26_10520V3.1 Pp3c26_10520 Nuclear transport factor 2 (NTF2) family protein with... 0.01 OrthoFinder output from all 47 species
Sam_g08781 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g083730.3.1 Solyc06g083730 mRNA endoribonuclease (G3BP) 0.04 OrthoFinder output from all 47 species
Spa_g23025 No alias mRNA endoribonuclease *(G3BP) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e008436_P002 Zm00001e008436 mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
Zm00001e014590_P001 Zm00001e014590 mRNA endoribonuclease (G3BP) 0.06 OrthoFinder output from all 47 species
Zm00001e022613_P001 Zm00001e022613 mRNA endoribonuclease (G3BP) 0.05 OrthoFinder output from all 47 species
Zm00001e040697_P001 Zm00001e040697 mRNA endoribonuclease (G3BP) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004576 oligosaccharyl transferase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 324 381
IPR002075 NTF2_dom 23 139
No external refs found!