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  5. LOC_Os04g27980.1

LOC_Os04g27980.1 (ATCHIA, CHIA, LOC_Os04g27980)


Aliases : ATCHIA, CHIA, LOC_Os04g27980

Description : Acidic endochitinase OS=Arabidopsis thaliana (sp|p19172|chia_arath : 252.0)


Gene families : OG0001372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g27980.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00104690 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00105100 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00095p00172710 ATCHIA, CHIA,... Acidic endochitinase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
AMTR_s00111p00033060 ATCHIA, CHIA,... Hevamine-A OS=Hevea brasiliensis 0.03 OrthoFinder output from all 47 species
Als_g47314 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01382 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07353.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07354.t2 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07355.t2 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29088.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70014.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70018.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70023.t1 ATCHIA, CHIA,... acidic chitinase *(CHIA) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g37792 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01027016001 ATCHIA, CHIA Acidic endochitinase OS=Nicotiana tabacum 0.03 OrthoFinder output from all 47 species
GSVIVT01027022001 ATCHIA, CHIA Hevamine-A OS=Hevea brasiliensis 0.07 OrthoFinder output from all 47 species
Gb_01614 ATCHIA, CHIA Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 379.0) 0.03 OrthoFinder output from all 47 species
Gb_38192 No alias Acidic endochitinase OS=Vitis vinifera... 0.02 OrthoFinder output from all 47 species
LOC_Os01g64110.1 ATCHIA, CHIA,... Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 333.0) 0.04 OrthoFinder output from all 47 species
LOC_Os05g15920.1 ATCHIA, CHIA,... no description available(sp|q5wmw5|xip_orysj : 438.0) 0.04 OrthoFinder output from all 47 species
Len_g43201 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
Mp1g22460.1 ATCHIA, CHIA Acidic endochitinase OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Mp2g03650.1 ATCHIA, CHIA Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 OrthoFinder output from all 47 species
Mp2g08740.1 ATCHIA, CHIA Acidic endochitinase SE2 OS=Beta vulgaris... 0.02 OrthoFinder output from all 47 species
Mpzg00570.1 ATCHIA, CHIA Hevamine-A OS=Hevea brasiliensis (sp|p23472|chly_hevbr : 244.0) 0.03 OrthoFinder output from all 47 species
Pir_g21727 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006135 ATCHIA, CHIA acidic chitinase *(CHIA) & original description: CDS=1-936 0.02 OrthoFinder output from all 47 species
Smo92194 ATCHIA, CHIA Hevamine-A OS=Hevea brasiliensis 0.03 OrthoFinder output from all 47 species
Zm00001e020261_P001 ATCHIA, CHIA,... Acidic endochitinase OS=Phaseolus angularis... 0.03 OrthoFinder output from all 47 species
Zm00001e021216_P001 Zm00001e021216 Xylanase inhibitor protein 2 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 34 288
No external refs found!