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  5. LOC_Os04g25400.2

LOC_Os04g25400.2 (LOC_Os04g25400)


Aliases : LOC_Os04g25400

Description : 7-hydroxymethyl chlorophyll(ide) a reductase


Gene families : OG0007059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g25400.2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00096400 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Ala_g05860 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Aop_g07470 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Cba_g18798 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Ceric.08G074700.1 Ceric.08G074700 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.62 No alias Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
Mp7g02790.1 No alias 7-hydroxymethyl chlorophyll(ide) a reductase 0.03 OrthoFinder output from all 47 species
Msp_g27369 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.03 OrthoFinder output from all 47 species
Nbi_g13256 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0061.g015444 No alias component *(SAM/Tob55) of outer mitochondrion membrane... 0.03 OrthoFinder output from all 47 species
Sam_g17635 No alias 7-hydroxymethyl chlorophyll(ide) a reductase *(HCAR) &... 0.02 OrthoFinder output from all 47 species
Solyc09g091100.4.1 Solyc09g091100 7-hydroxymethyl chlorophyll(ide) a reductase 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004177 aminopeptidase activity IEP HCCA
MF GO:0004197 cysteine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017150 tRNA dihydrouridine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0106413 dihydrouridine synthase activity IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR007525 FrhB_FdhB_C 48 201
IPR007516 Co_F420_Hydgase/DH_bsu_N 6 39
No external refs found!