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  5. LOC_Os04g22900.2

LOC_Os04g22900.2 (LOC_Os04g22900)


Aliases : LOC_Os04g22900

Description : Horcolin OS=Hordeum vulgare subsp. vulgare (sp|p82953|lech_horvv : 103.0)


Gene families : OG0001384 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g22900.2
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00249920 evm_27.TU.AmTr_v1... Jacalin-related lectin 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00036p00183430 evm_27.TU.AmTr_v1... Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G73040 No alias Mannose-binding lectin superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G16420 PBP1, JAL30 PYK10-binding protein 1 0.03 OrthoFinder output from all 47 species
Aev_g39103 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66673.t1 Aspi01Gene66673 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01009788001 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016899001 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_08638 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Gb_17001 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_17749 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_22485 No alias Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
MA_286894g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_396269g0010 No alias Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Msp_g39584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g078600.3.1 Solyc10g078600 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e026409_P002 Zm00001e026409 Jacalin-related lectin 19 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e032084_P001 Zm00001e032084 Jacalin-related lectin 3 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR001229 Jacalin-like_lectin_dom 32 148
No external refs found!