LOC_Os04g22380.1 (LOC_Os04g22380)


Aliases : LOC_Os04g22380

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum (sp|q6rvv4|tic32_pea : 302.0)


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g22380.1

Target Alias Description ECC score Gene Family Method Actions
Aev_g16585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37903 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11001 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g23987 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06314.t1 Aspi01Gene06314 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24658.t1 Aspi01Gene24658 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene56850.t1 Aspi01Gene56850 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56854.t1 Aspi01Gene56854 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57992.t1 Aspi01Gene57992 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene57993.t1 Aspi01Gene57993 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0310.g064122 No alias not classified & original description: CDS=91-1152 0.02 OrthoFinder output from all 47 species
Cba_g34321 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g48352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g00772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_01341 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Gb_09534 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09535 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Len_g41763 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07565 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g38370 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_24622g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.04 OrthoFinder output from all 47 species
Nbi_g17482 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14451 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g23484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012608 No alias not classified & original description: CDS=342-1457 0.03 OrthoFinder output from all 47 species
Smo228800 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo421434 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species
Solyc03g025390.3.1 Solyc03g025390 component Tic32 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Spa_g25270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19332 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e036623_P001 Zm00001e036623 Short-chain dehydrogenase TIC 32, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008272 sulfate transport IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015116 sulfate transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0072348 sulfur compound transport IEP HCCA
MF GO:1901682 sulfur compound transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 32 181
No external refs found!