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  5. LOC_Os04g20920.1

LOC_Os04g20920.1 (LOC_Os04g20920)


Aliases : LOC_Os04g20920

Description : BTB/POZ domain-containing protein At2g13690 OS=Arabidopsis thaliana (sp|q9skh2|y2369_arath : 323.0)


Gene families : OG0001445 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001445_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g20920.1

Target Alias Description ECC score Gene Family Method Actions
Cba_g78936 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01019044001 No alias BTB/POZ domain-containing protein At3g50780... 0.06 OrthoFinder output from all 47 species
LOC_Os12g40480.1 LOC_Os12g40480 BTB/POZ domain-containing protein At3g50780... 0.05 OrthoFinder output from all 47 species
Pnu_g02817 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Pnu_g09970 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
Solyc11g005950.2.1 Solyc11g005950 BTB/POZ domain-containing protein At2g13690... 0.04 OrthoFinder output from all 47 species
Zm00001e011677_P001 Zm00001e011677 BTB/POZ domain-containing protein At2g13690... 0.07 OrthoFinder output from all 47 species
Zm00001e041407_P001 Zm00001e041407 BTB/POZ domain-containing protein At1g63850... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!