1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g17130.1

LOC_Os04g17130.1 (LOC_Os04g17130)


Aliases : LOC_Os04g17130

Description : group-II formin actin filament elongation factor


Gene families : OG0000743 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000743_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g17130.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00079860 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00080420 evm_27.TU.AmTr_v1... Formin-like protein 20 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g06933 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07481 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Als_g21766 No alias group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Aob_g21727 AFH14 group-II formin actin filament elongation factor &... 0.05 OrthoFinder output from all 47 species
Azfi_s0015.g014023 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Dcu_g40736 FH6, ATFH6 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Dde_g22361 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
GSVIVT01003875001 No alias Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Gb_24687 No alias Formin-like protein 18 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_24688 No alias Formin-like protein 13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g08540.2 LOC_Os06g08540 Formin-like protein 6 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
LOC_Os10g02980.1 AFH14, LOC_Os10g02980 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Mp4g12830.1 AFH14 group-II formin actin filament elongation factor 0.02 OrthoFinder output from all 47 species
Msp_g17151 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Pir_g18208 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008535 AFH14 group-II formin actin filament elongation factor &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010400 AFH14 group-II formin actin filament elongation factor &... 0.03 OrthoFinder output from all 47 species
Solyc12g010110.3.1 Solyc12g010110 Formin-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e003000_P001 Zm00001e003000 group-II formin actin filament elongation factor 0.08 OrthoFinder output from all 47 species
Zm00001e018139_P003 Zm00001e018139 group-II formin actin filament elongation factor 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR015425 FH2_Formin 1254 1493
IPR014020 Tensin_C2-dom 198 337
No external refs found!