LOC_Os04g16848.1 (LOC_Os04g16848)

Aliases : LOC_Os04g16848

Description : component PsbH of PS-II complex

Gene families : OG0011086 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0011086_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os04g16848.1

Target	Alias	Description	ECC score	Gene Family Method
ATCG00710	PSBH	photosystem II reaction center protein H	0.04	OrthoFinder output from all 47 species
Ceric.05G041600.1	PSBH, Ceric.05G041600	component *(PsbH) of PS-II complex & original...	0.08	OrthoFinder output from all 47 species
Ceric.05G051400.1	PSBH, Ceric.05G051400	component *(PsbH) of PS-II complex & original...	0.03	OrthoFinder output from all 47 species
Ceric.16G061100.1	PSBH, Ceric.16G061100	component *(PsbH) of PS-II complex & original...	0.04	OrthoFinder output from all 47 species
Ceric.29G003500.1	PSBH, Ceric.29G003500	component *(PsbH) of PS-II complex & original...	0.08	OrthoFinder output from all 47 species
Ceric.38G008300.1	PSBH, Ceric.38G008300	component *(PsbH) of PS-II complex & original...	0.08	OrthoFinder output from all 47 species
LOC_Os08g15296.1	LOC_Os08g15296	component PsbH of PS-II complex	0.12	OrthoFinder output from all 47 species
Solyc00g500026.1.1	PSBH, Solyc00g500026	component PsbH of PS-II complex	0.07	OrthoFinder output from all 47 species
Solyc00g500072.1.1	PSBH, Solyc00g500072	component PsbH of PS-II complex	0.07	OrthoFinder output from all 47 species
Solyc11g006675.1.1	PSBH, Solyc11g006675	component PsbH of PS-II complex	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
CC	GO:0009521	photosystem	None	Extended
CC	GO:0009523	photosystem II	IEA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015979	photosynthesis	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0031647	regulation of protein stability	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
MF	GO:0042301	phosphate ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0050821	protein stabilization	IEA	Interproscan
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
MF	GO:0009055	electron transfer activity	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
BP	GO:0009772	photosynthetic electron transport in photosystem II	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
BP	GO:0019684	photosynthesis, light reaction	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
MF	GO:0045156	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001056	PSII_PsbH	16	67

External Links

No external refs found!