LOC_Os08g24760 (Os08g0335000)


Aliases : Os08g0335000

Description : 27.1.2 RNA.processing.RNA helicase Encodes a homolog of the yeast PRP2 protein, one of four related DEAH RNA helicases identified as essential cofactors for RNA splicing. ENHANCED SILENCING PHENOTYPE 3 (ESP3)


Gene families : OG_01_0000259 (Gene family) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os08g24760
Cluster HCCA cluster: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AT1G26370 No alias RNA helicase family protein 0.02 Gene family
AT1G32490 ESP3, EMB2733 RNA helicase family protein 0.02 Gene family
AT3G26560 No alias ATP-dependent RNA helicase, putative 0.04 Gene family
Cpa|evm.model.tig00000796.23 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.01 Gene family
Cre03.g182950 No alias 27.1.2 RNA.processing.RNA helicase RNA helicase family protein 0.01 Gene family
Cre07.g349100 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family
GSVIVT01007911001 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
GSVIVT01029863001 No alias 27.1 RNA.processing ATP-dependent RNA helicase, putative 0.03 Gene family
MA_277016g0010 No alias 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
MA_5383g0010 No alias 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
Solyc03g115390.3.1 Solyc03g115390.3 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.02 Gene family
Solyc10g076910.2.1 Solyc10g076910.2 27.1.2 RNA.processing.RNA helicase embryo defective 3011... 0.02 Gene family
Zm00001d049980 GRMZM2G121776 27.1.2 RNA.processing.RNA helicase Encodes a homolog of... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007502 Helicase-assoc_dom 803 877
IPR011709 DUF1605 951 1028
IPR001650 Helicase_C 614 741
No external refs found!