Aliases : PSBA, LOC_Os04g16770
Description : component PsbA/D1 of PS-II reaction center complex
Gene families : OG0001107 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001107_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: LOC_Os04g16770.1 | |
Cluster | HCCA: Cluster_1 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g33560 | PSBD | component *(PsbD/D2) of PS-II reaction center complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.02G016000.1 | PSBD, Ceric.02G016000 | component *(PsbD/D2) of PS-II reaction center complex &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.07G016000.1 | PSBA, Ceric.07G016000 | not classified & original description: pacid=50626123... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.29G050900.1 | PSBA, Ceric.29G050900 | not classified & original description: pacid=50624438... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.36G044800.1 | PSBA, Ceric.36G044800 | not classified & original description: pacid=50568302... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os08g35420.1 | PSBA, LOC_Os08g35420 | component PsbA/D1 of PS-II reaction center complex | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEA | Interproscan |
BP | GO:0019684 | photosynthesis, light reaction | IEA | Interproscan |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
BP | GO:0009725 | response to hormone | IEP | HCCA |
BP | GO:0010033 | response to organic substance | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
MF | GO:0020037 | heme binding | IEP | HCCA |
MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
CC | GO:0043226 | organelle | IEP | HCCA |
CC | GO:0043229 | intracellular organelle | IEP | HCCA |
MF | GO:0043531 | ADP binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046906 | tetrapyrrole binding | IEP | HCCA |
MF | GO:0051536 | iron-sulfur cluster binding | IEP | HCCA |
MF | GO:0051540 | metal cluster binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000484 | Photo_RC_L/M | 28 | 327 |
No external refs found! |