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  5. LOC_Os04g15800.1

LOC_Os04g15800.1 (LOC_Os04g15800)


Aliases : LOC_Os04g15800

Description : myosin adaptor protein (MadA)


Gene families : OG0001542 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001542_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os04g15800.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00204600 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.myosin... 0.2 OrthoFinder output from all 47 species
AT4G02800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.25 OrthoFinder output from all 47 species
Adi_g011385 No alias myosin adaptor protein *(MadA) & original description: none 0.08 OrthoFinder output from all 47 species
Aev_g18548 No alias myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g24360 No alias myosin adaptor protein *(MadA) & original description: none 0.11 OrthoFinder output from all 47 species
Als_g16451 No alias myosin adaptor protein *(MadA) & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g12834 No alias myosin adaptor protein *(MadA) & original description: none 0.21 OrthoFinder output from all 47 species
Aspi01Gene18486.t1 Aspi01Gene18486 myosin adaptor protein *(MadA) & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene49282.t1 Aspi01Gene49282 myosin adaptor protein *(MadA) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000355 No alias myosin adaptor protein *(MadA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.27G044700.1 Ceric.27G044700 myosin adaptor protein *(MadA) & original description:... 0.12 OrthoFinder output from all 47 species
Dcu_g06833 No alias myosin adaptor protein *(MadA) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011083001 No alias Cytoskeleton.microfilament network.myosin... 0.38 OrthoFinder output from all 47 species
Gb_02819 No alias myosin adaptor protein (MadA) 0.15 OrthoFinder output from all 47 species
Len_g40909 No alias myosin adaptor protein *(MadA) & original description: none 0.06 OrthoFinder output from all 47 species
MA_84757g0010 No alias myosin adaptor protein (MadA) 0.22 OrthoFinder output from all 47 species
Msp_g10133 No alias myosin adaptor protein *(MadA) & original description: none 0.14 OrthoFinder output from all 47 species
Nbi_g25656 No alias myosin adaptor protein *(MadA) & original description: none 0.22 OrthoFinder output from all 47 species
Ppi_g16565 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0079.g017832 No alias myosin adaptor protein *(MadA) & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g14885 No alias myosin adaptor protein *(MadA) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc06g008980.3.1 Solyc06g008980 myosin adaptor protein (MadA) 0.27 OrthoFinder output from all 47 species
Zm00001e008503_P002 Zm00001e008503 myosin adaptor protein (MadA) 0.25 OrthoFinder output from all 47 species
Zm00001e027306_P005 Zm00001e027306 myosin adaptor protein (MadA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!